Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 CSPG4P11-201ENST00000560634 4910 ntBASIC12.14□□□□□ -0.47
NKX2-1P43699 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NKX2-1P43699 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NKX2-1P43699 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 HTR5BP-201ENST00000430851 1154 ntBASIC12.14□□□□□ -0.47
NKX2-1P43699 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.14□□□□□ -0.47
NKX2-1P43699 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.14□□□□□ -0.47
NKX2-1P43699 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 AL589739.1-201ENST00000607720 493 ntBASIC12.14□□□□□ -0.47
NKX2-1P43699 MIR6074-201ENST00000612054 107 ntBASIC12.14□□□□□ -0.47
NKX2-1P43699 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.14□□□□□ -0.47
NKX2-1P43699 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
NKX2-1P43699 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.14□□□□□ -0.47
NKX2-1P43699 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 CLK3P2-201ENST00000427566 1453 ntBASIC12.14□□□□□ -0.47
NKX2-1P43699 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NKX2-1P43699 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.14□□□□□ -0.47
NKX2-1P43699 CETN4P-206ENST00000642099 2168 ntBASIC12.13□□□□□ -0.47
NKX2-1P43699 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
NKX2-1P43699 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 AC090643.2-201ENST00000623442 2029 ntBASIC12.13□□□□□ -0.47
NKX2-1P43699 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX2-1P43699 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
NKX2-1P43699 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-1P43699 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 HLA-K-203ENST00000430151 1046 ntBASIC12.13□□□□□ -0.47
NKX2-1P43699 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.13□□□□□ -0.47
NKX2-1P43699 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-1P43699 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX2-1P43699 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms