Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCD3P28288 AL354877.1-201ENST00000424412 413 ntBASIC13.6□□□□□ -0.23
ABCD3P28288 AL035414.1-201ENST00000451327 857 ntBASIC13.6□□□□□ -0.23
ABCD3P28288 CICP12-201ENST00000455801 843 ntBASIC13.6□□□□□ -0.23
ABCD3P28288 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.6□□□□□ -0.23
ABCD3P28288 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCD3P28288 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.6□□□□□ -0.23
ABCD3P28288 AC132192.2-201ENST00000596206 1147 ntBASIC13.6□□□□□ -0.23
ABCD3P28288 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ABCD3P28288 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.6□□□□□ -0.23
ABCD3P28288 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ABCD3P28288 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 MIR1908-201ENST00000410394 80 ntBASIC13.59□□□□□ -0.23
ABCD3P28288 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.59□□□□□ -0.23
ABCD3P28288 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 AC022447.6-201ENST00000515522 438 ntBASIC13.59□□□□□ -0.23
ABCD3P28288 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.59□□□□□ -0.23
ABCD3P28288 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 AC009955.4-201ENST00000597192 544 ntBASIC13.59□□□□□ -0.23
ABCD3P28288 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.59□□□□□ -0.23
ABCD3P28288 AC091271.1-201ENST00000611877 1162 ntBASIC13.59□□□□□ -0.23
ABCD3P28288 AL096828.3-201ENST00000615354 462 ntBASIC13.59□□□□□ -0.23
ABCD3P28288 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.59□□□□□ -0.23
ABCD3P28288 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.59□□□□□ -0.23
ABCD3P28288 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 AC015656.1-201ENST00000624209 3578 ntBASIC13.59□□□□□ -0.23
ABCD3P28288 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.59□□□□□ -0.23
ABCD3P28288 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ABCD3P28288 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
ABCD3P28288 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCD3P28288 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ABCD3P28288 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ABCD3P28288 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ABCD3P28288 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
ABCD3P28288 KHSRPP1-201ENST00000427983 1768 ntBASIC13.58□□□□□ -0.23
ABCD3P28288 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms