Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CNTFRP26992 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CNTFRP26992 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CNTFRP26992 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.91□□□□□ -0.5
CNTFRP26992 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 MRPL37P1-201ENST00000592451 1337 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CNTFRP26992 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CNTFRP26992 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 RN7SKP175-201ENST00000408472 289 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 MIR1202-201ENST00000408529 83 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 CNN2P8-201ENST00000421872 913 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CNTFRP26992 U91328.1-201ENST00000437528 223 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.9□□□□□ -0.5
CNTFRP26992 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
CNTFRP26992 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 GCOM2-201ENST00000509133 1104 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CNTFRP26992 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.9□□□□□ -0.5
CNTFRP26992 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.9□□□□□ -0.5
CNTFRP26992 KRT17P8-201ENST00000540749 863 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.9□□□□□ -0.5
CNTFRP26992 MIR4683-201ENST00000579659 81 ntBASIC11.9□□□□□ -0.5
CNTFRP26992 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.9□□□□□ -0.5
CNTFRP26992 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.9□□□□□ -0.5
CNTFRP26992 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.9□□□□□ -0.5
CNTFRP26992 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CNTFRP26992 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CNTFRP26992 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.9□□□□□ -0.5
CNTFRP26992 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.9□□□□□ -0.51
CNTFRP26992 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.9□□□□□ -0.51
CNTFRP26992 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
CNTFRP26992 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CNTFRP26992 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.89□□□□□ -0.51
CNTFRP26992 AC015688.4-201ENST00000580780 1647 ntBASIC11.89□□□□□ -0.51
CNTFRP26992 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.89□□□□□ -0.51
CNTFRP26992 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.89□□□□□ -0.51
CNTFRP26992 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.89□□□□□ -0.51
CNTFRP26992 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.89□□□□□ -0.51
CNTFRP26992 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.89□□□□□ -0.51
CNTFRP26992 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 AC015802.1-201ENST00000588104 1449 ntBASIC11.89□□□□□ -0.51
CNTFRP26992 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.89□□□□□ -0.51
CNTFRP26992 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CNTFRP26992 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms