Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LMNB1P20700 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.63■□□□□ 0.41
LMNB1P20700 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 AL929302.1-201ENST00000426556 871 ntBASIC17.63■□□□□ 0.41
LMNB1P20700 AC092580.1-201ENST00000433998 658 ntBASIC17.63■□□□□ 0.41
LMNB1P20700 BPIFB5P-201ENST00000457066 1099 ntBASIC17.63■□□□□ 0.41
LMNB1P20700 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.63■□□□□ 0.41
LMNB1P20700 AC018846.1-201ENST00000568231 183 ntBASIC17.63■□□□□ 0.41
LMNB1P20700 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LMNB1P20700 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LMNB1P20700 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LMNB1P20700 AL139384.1-201ENST00000612143 3047 ntBASIC17.63■□□□□ 0.41
LMNB1P20700 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMNB1P20700 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
LMNB1P20700 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LMNB1P20700 AC105917.1-201ENST00000506637 2539 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.62■□□□□ 0.41
LMNB1P20700 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.62■□□□□ 0.41
LMNB1P20700 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.62■□□□□ 0.41
LMNB1P20700 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 RNVU1-8-201ENST00000364272 125 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 OR8T1P-201ENST00000421347 918 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.62■□□□□ 0.41
LMNB1P20700 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.62■□□□□ 0.41
LMNB1P20700 RPL3P5-201ENST00000441645 1232 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 ST13P19-201ENST00000442505 1124 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.62■□□□□ 0.41
LMNB1P20700 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.62■□□□□ 0.41
LMNB1P20700 SCARNA12-201ENST00000459155 270 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.62■□□□□ 0.41
LMNB1P20700 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.62■□□□□ 0.41
LMNB1P20700 TRMT112P3-201ENST00000580149 358 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.62■□□□□ 0.41
LMNB1P20700 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.62■□□□□ 0.41
LMNB1P20700 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LMNB1P20700 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.62■□□□□ 0.41
LMNB1P20700 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 FUCA1P1-201ENST00000374476 1351 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
LMNB1P20700 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.62■□□□□ 0.41
LMNB1P20700 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMNB1P20700 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.62■□□□□ 0.41
LMNB1P20700 AC105250.1-201ENST00000509378 2057 ntBASIC17.62■□□□□ 0.41
LMNB1P20700 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.62■□□□□ 0.41
LMNB1P20700 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMNB1P20700 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNB1P20700 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.61■□□□□ 0.41
LMNB1P20700 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMNB1P20700 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.61■□□□□ 0.41
LMNB1P20700 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LMNB1P20700 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNB1P20700 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.61■□□□□ 0.41
LMNB1P20700 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMNB1P20700 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LMNB1P20700 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.61■□□□□ 0.41
LMNB1P20700 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LMNB1P20700 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMNB1P20700 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.61■□□□□ 0.41
LMNB1P20700 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms