Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.78■□□□□ 0.12
SYN1P17600 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.78■□□□□ 0.12
SYN1P17600 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.78■□□□□ 0.12
SYN1P17600 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.78■□□□□ 0.12
SYN1P17600 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.78■□□□□ 0.12
SYN1P17600 RHOQP2-201ENST00000449922 579 ntBASIC15.78■□□□□ 0.12
SYN1P17600 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.78■□□□□ 0.12
SYN1P17600 DUT-207ENST00000559416 635 ntTSL 2 BASIC15.78■□□□□ 0.12
SYN1P17600 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.78■□□□□ 0.12
SYN1P17600 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.78■□□□□ 0.12
SYN1P17600 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.78■□□□□ 0.12
SYN1P17600 MIR6125-201ENST00000618986 96 ntBASIC15.78■□□□□ 0.12
SYN1P17600 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 AGGF1P1-201ENST00000509500 2073 ntBASIC15.78■□□□□ 0.12
SYN1P17600 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SYN1P17600 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.78■□□□□ 0.12
SYN1P17600 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.78■□□□□ 0.12
SYN1P17600 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.78■□□□□ 0.12
SYN1P17600 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYN1P17600 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SYN1P17600 AL391005.1-201ENST00000623953 2435 ntBASIC15.77■□□□□ 0.12
SYN1P17600 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 CCL25-202ENST00000315626 450 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.77■□□□□ 0.12
SYN1P17600 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 RN7SL375P-201ENST00000492442 298 ntBASIC15.77■□□□□ 0.12
SYN1P17600 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.77■□□□□ 0.12
SYN1P17600 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.77■□□□□ 0.12
SYN1P17600 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.77■□□□□ 0.12
SYN1P17600 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 FBXO36P1-201ENST00000579006 471 ntBASIC15.77■□□□□ 0.12
SYN1P17600 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.77■□□□□ 0.12
SYN1P17600 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.77■□□□□ 0.12
SYN1P17600 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SYN1P17600 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.77■□□□□ 0.12
SYN1P17600 CR392039.1-201ENST00000623217 204 ntBASIC15.77■□□□□ 0.12
SYN1P17600 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYN1P17600 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SYN1P17600 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SYN1P17600 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SYN1P17600 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SYN1P17600 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.77■□□□□ 0.11
SYN1P17600 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.77■□□□□ 0.11
SYN1P17600 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYN1P17600 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYN1P17600 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYN1P17600 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYN1P17600 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYN1P17600 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.76■□□□□ 0.11
SYN1P17600 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.76■□□□□ 0.11
SYN1P17600 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
SYN1P17600 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms