Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCNAP12004 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.46□□□□□ -0.09
PCNAP12004 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCNAP12004 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCNAP12004 AC087386.2-201ENST00000623212 4637 ntBASIC14.46□□□□□ -0.09
PCNAP12004 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCNAP12004 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.46□□□□□ -0.09
PCNAP12004 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.46□□□□□ -0.09
PCNAP12004 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCNAP12004 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCNAP12004 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.46□□□□□ -0.09
PCNAP12004 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.46□□□□□ -0.09
PCNAP12004 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
PCNAP12004 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.46□□□□□ -0.1
PCNAP12004 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PCNAP12004 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCNAP12004 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCNAP12004 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCNAP12004 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCNAP12004 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 AC134312.5-201ENST00000568031 1313 ntBASIC14.45□□□□□ -0.1
PCNAP12004 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
PCNAP12004 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.45□□□□□ -0.1
PCNAP12004 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.45□□□□□ -0.1
PCNAP12004 FO681548.1-201ENST00000455617 1132 ntBASIC14.45□□□□□ -0.1
PCNAP12004 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.45□□□□□ -0.1
PCNAP12004 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.45□□□□□ -0.1
PCNAP12004 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.45□□□□□ -0.1
PCNAP12004 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 AL603764.1-201ENST00000636452 321 ntBASIC14.45□□□□□ -0.1
PCNAP12004 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
PCNAP12004 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.45□□□□□ -0.1
PCNAP12004 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCNAP12004 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.44□□□□□ -0.1
PCNAP12004 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PCNAP12004 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCNAP12004 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCNAP12004 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCNAP12004 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 BAATP1-201ENST00000412284 1225 ntBASIC14.44□□□□□ -0.1
PCNAP12004 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.44□□□□□ -0.1
PCNAP12004 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PCNAP12004 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PCNAP12004 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.44□□□□□ -0.1
PCNAP12004 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCNAP12004 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms