Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MAGEA5-201ENST00000446757 942 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AC131206.1-201ENST00000538078 1211 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AC009779.1-201ENST00000551138 283 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 RN7SL190P-201ENST00000582519 257 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AC008805.1-201ENST00000590892 364 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 MIR6720-201ENST00000611664 98 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 ZBED1P1-201ENST00000502364 1930 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AGAP7P-201ENST00000582299 2062 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 AGAP14-201ENST00000624701 2060 ntBASIC13.91□□□□□ -0.18
RAB40ALP0C0E4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 VDAC1P1-201ENST00000439229 848 ntBASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 CICP12-201ENST00000455801 843 ntBASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 AL160314.3-201ENST00000556041 767 ntBASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 AC016629.1-201ENST00000596579 586 ntBASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 NAP1L6-202ENST00000641404 1222 ntBASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 Z98259.2-201ENST00000641583 609 ntBASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 AC007191.1-201ENST00000623179 2995 ntBASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB40ALP0C0E4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.9□□□□□ -0.19
RAB40ALP0C0E4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40ALP0C0E4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40ALP0C0E4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB40ALP0C0E4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms