Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CD74P04233 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 AL022342.1-201ENST00000400363 863 ntBASIC12.43□□□□□ -0.42
CD74P04233 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 HLA-V-204ENST00000476601 1289 ntBASIC12.43□□□□□ -0.42
CD74P04233 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.43□□□□□ -0.42
CD74P04233 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.43□□□□□ -0.42
CD74P04233 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.43□□□□□ -0.42
CD74P04233 SORD2P-201ENST00000558556 1069 ntBASIC12.43□□□□□ -0.42
CD74P04233 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.43□□□□□ -0.42
CD74P04233 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
CD74P04233 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.43□□□□□ -0.42
CD74P04233 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CD74P04233 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.43□□□□□ -0.42
CD74P04233 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CD74P04233 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CD74P04233 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CD74P04233 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD74P04233 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CD74P04233 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CD74P04233 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CD74P04233 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.42□□□□□ -0.42
CD74P04233 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.42□□□□□ -0.42
CD74P04233 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
CD74P04233 SPDYE7P-202ENST00000420373 878 ntBASIC12.42□□□□□ -0.42
CD74P04233 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.42□□□□□ -0.42
CD74P04233 AC026434.2-201ENST00000506094 1078 ntBASIC12.42□□□□□ -0.42
CD74P04233 AC026410.3-201ENST00000514280 936 ntBASIC12.42□□□□□ -0.42
CD74P04233 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.42□□□□□ -0.42
CD74P04233 SLC25A1P1-201ENST00000528351 927 ntBASIC12.42□□□□□ -0.42
CD74P04233 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.42□□□□□ -0.42
CD74P04233 AC103988.2-201ENST00000561804 725 ntBASIC12.42□□□□□ -0.42
CD74P04233 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 AC107373.2-201ENST00000607735 490 ntBASIC12.42□□□□□ -0.42
CD74P04233 TEX28P1-201ENST00000613479 1221 ntBASIC12.42□□□□□ -0.42
CD74P04233 TEX28P2-201ENST00000617764 1221 ntBASIC12.42□□□□□ -0.42
CD74P04233 AL158212.4-201ENST00000624062 1286 ntBASIC12.42□□□□□ -0.42
CD74P04233 AL603764.1-201ENST00000636452 321 ntBASIC12.42□□□□□ -0.42
CD74P04233 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 AL118506.1-201ENST00000601296 3082 ntBASIC12.42□□□□□ -0.42
CD74P04233 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.42□□□□□ -0.42
CD74P04233 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CD74P04233 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD74P04233 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD74P04233 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms