Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.52■□□□□ 0.39
MBD4O95243 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MBD4O95243 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MBD4O95243 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MBD4O95243 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MBD4O95243 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MBD4O95243 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MBD4O95243 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 TUBBP5-203ENST00000508529 1334 ntBASIC17.51■□□□□ 0.39
MBD4O95243 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MBD4O95243 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.51■□□□□ 0.39
MBD4O95243 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
MBD4O95243 CYP46A4P-201ENST00000414953 267 ntBASIC17.51■□□□□ 0.39
MBD4O95243 ACTG1P2-201ENST00000415776 1125 ntBASIC17.51■□□□□ 0.39
MBD4O95243 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.51■□□□□ 0.39
MBD4O95243 ACTG1P11-201ENST00000425411 1125 ntBASIC17.51■□□□□ 0.39
MBD4O95243 AC011742.3-201ENST00000439053 820 ntBASIC17.51■□□□□ 0.39
MBD4O95243 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.51■□□□□ 0.39
MBD4O95243 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.51■□□□□ 0.39
MBD4O95243 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MBD4O95243 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MBD4O95243 AC215219.1-201ENST00000400706 1817 ntBASIC17.51■□□□□ 0.39
MBD4O95243 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MBD4O95243 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MBD4O95243 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD4O95243 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MBD4O95243 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.5■□□□□ 0.39
MBD4O95243 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
MBD4O95243 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MBD4O95243 AC015656.1-201ENST00000624209 3578 ntBASIC17.5■□□□□ 0.39
MBD4O95243 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MBD4O95243 KRT18P36-201ENST00000411618 1276 ntBASIC17.5■□□□□ 0.39
MBD4O95243 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.5■□□□□ 0.39
MBD4O95243 AC078875.1-201ENST00000431907 724 ntBASIC17.5■□□□□ 0.39
MBD4O95243 RCC2P8-201ENST00000502779 1035 ntBASIC17.5■□□□□ 0.39
MBD4O95243 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.5■□□□□ 0.39
MBD4O95243 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.5■□□□□ 0.39
MBD4O95243 AC027237.1-201ENST00000560942 655 ntBASIC17.5■□□□□ 0.39
MBD4O95243 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
MBD4O95243 AL805961.1-203ENST00000641078 1258 ntBASIC17.5■□□□□ 0.39
MBD4O95243 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD4O95243 AC068418.2-201ENST00000577309 3703 ntBASIC17.5■□□□□ 0.39
MBD4O95243 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
MBD4O95243 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
MBD4O95243 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 AC097359.2-201ENST00000604992 2389 ntBASIC17.49■□□□□ 0.39
MBD4O95243 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms