Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RFPL1O75677 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.83□□□□□ -0.04
RFPL1O75677 TLE1P1-201ENST00000422965 589 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.83□□□□□ -0.04
RFPL1O75677 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.83□□□□□ -0.04
RFPL1O75677 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.83□□□□□ -0.04
RFPL1O75677 SNX29P1-201ENST00000548357 1007 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.83□□□□□ -0.04
RFPL1O75677 MIR4525-201ENST00000580000 75 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.83□□□□□ -0.04
RFPL1O75677 BTNL10-201ENST00000595971 695 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 MIR6074-201ENST00000612054 107 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.83□□□□□ -0.04
RFPL1O75677 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 KRT8P35-201ENST00000483942 1338 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RFPL1O75677 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 AL136172.1-201ENST00000598590 1394 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RFPL1O75677 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RFPL1O75677 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 HSPA8P5-201ENST00000456928 2069 ntBASIC14.82□□□□□ -0.04
RFPL1O75677 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.82□□□□□ -0.04
RFPL1O75677 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 CROCCP4-201ENST00000457096 498 ntBASIC14.82□□□□□ -0.04
RFPL1O75677 RPL13AP25-201ENST00000484130 612 ntBASIC14.82□□□□□ -0.04
RFPL1O75677 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 AC131206.1-201ENST00000538078 1211 ntBASIC14.82□□□□□ -0.04
RFPL1O75677 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.82□□□□□ -0.04
RFPL1O75677 AC120045.2-201ENST00000567334 178 ntBASIC14.82□□□□□ -0.04
RFPL1O75677 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RFPL1O75677 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.82□□□□□ -0.04
RFPL1O75677 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RFPL1O75677 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RFPL1O75677 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.82□□□□□ -0.04
RFPL1O75677 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RFPL1O75677 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFPL1O75677 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RFPL1O75677 REXO1L6P-201ENST00000603433 1515 ntBASIC14.82□□□□□ -0.04
RFPL1O75677 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RFPL1O75677 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFPL1O75677 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFPL1O75677 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.81□□□□□ -0.04
RFPL1O75677 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RFPL1O75677 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RFPL1O75677 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.81□□□□□ -0.04
RFPL1O75677 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.81□□□□□ -0.04
RFPL1O75677 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.81□□□□□ -0.04
RFPL1O75677 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFPL1O75677 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFPL1O75677 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFPL1O75677 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms