Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRIM3O75382 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM3O75382 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM3O75382 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
TRIM3O75382 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM3O75382 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM3O75382 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM3O75382 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRIM3O75382 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM3O75382 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM3O75382 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 AC117489.1-201ENST00000625169 3217 ntBASIC13.85□□□□□ -0.19
TRIM3O75382 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.85□□□□□ -0.19
TRIM3O75382 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRIM3O75382 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM3O75382 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM3O75382 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRIM3O75382 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 CD8B2-202ENST00000417670 633 ntBASIC13.85□□□□□ -0.19
TRIM3O75382 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.85□□□□□ -0.19
TRIM3O75382 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.85□□□□□ -0.19
TRIM3O75382 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM3O75382 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM3O75382 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM3O75382 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM3O75382 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
TRIM3O75382 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM3O75382 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM3O75382 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRIM3O75382 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 AL157414.3-201ENST00000624276 1954 ntBASIC13.84□□□□□ -0.19
TRIM3O75382 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM3O75382 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM3O75382 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms