Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 TFAMP1-201ENST00000412727 736 ntBASIC11.48□□□□□ -0.57
PDE6DO43924 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.48□□□□□ -0.57
PDE6DO43924 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.48□□□□□ -0.57
PDE6DO43924 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.48□□□□□ -0.57
PDE6DO43924 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.48□□□□□ -0.57
PDE6DO43924 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
PDE6DO43924 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
PDE6DO43924 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.48□□□□□ -0.57
PDE6DO43924 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.48□□□□□ -0.57
PDE6DO43924 FAM215A-202ENST00000632077 792 ntBASIC11.48□□□□□ -0.57
PDE6DO43924 AL358472.4-201ENST00000633140 710 ntBASIC11.48□□□□□ -0.57
PDE6DO43924 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 AC009474.1-201ENST00000455096 1565 ntBASIC11.48□□□□□ -0.57
PDE6DO43924 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.48□□□□□ -0.57
PDE6DO43924 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
PDE6DO43924 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.48□□□□□ -0.57
PDE6DO43924 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
PDE6DO43924 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
PDE6DO43924 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PDE6DO43924 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PDE6DO43924 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 AL121723.1-201ENST00000445194 1519 ntBASIC11.47□□□□□ -0.57
PDE6DO43924 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
PDE6DO43924 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
PDE6DO43924 AC015922.1-201ENST00000421102 1152 ntBASIC11.47□□□□□ -0.57
PDE6DO43924 AC098831.1-202ENST00000438821 336 ntBASIC11.47□□□□□ -0.57
PDE6DO43924 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.47□□□□□ -0.57
PDE6DO43924 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.47□□□□□ -0.57
PDE6DO43924 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.47□□□□□ -0.57
PDE6DO43924 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 KRT8P23-201ENST00000560090 1207 ntBASIC11.47□□□□□ -0.57
PDE6DO43924 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.47□□□□□ -0.57
PDE6DO43924 KRT18P8-201ENST00000581937 1246 ntBASIC11.47□□□□□ -0.57
PDE6DO43924 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
PDE6DO43924 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.47□□□□□ -0.57
PDE6DO43924 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PDE6DO43924 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms