Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP2AO43633 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.58■□□□□ 0.25
CHMP2AO43633 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.58■□□□□ 0.25
CHMP2AO43633 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP2AO43633 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP2AO43633 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CHMP2AO43633 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP2AO43633 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP2AO43633 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.58■□□□□ 0.25
CHMP2AO43633 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP2AO43633 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CHMP2AO43633 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHMP2AO43633 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.58■□□□□ 0.25
CHMP2AO43633 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP2AO43633 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP2AO43633 MIR1247-201ENST00000408206 136 ntBASIC16.58■□□□□ 0.24
CHMP2AO43633 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP2AO43633 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.58■□□□□ 0.24
CHMP2AO43633 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP2AO43633 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP2AO43633 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.58■□□□□ 0.24
CHMP2AO43633 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CHMP2AO43633 AP001258.2-201ENST00000529891 490 ntBASIC16.58■□□□□ 0.24
CHMP2AO43633 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP2AO43633 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP2AO43633 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP2AO43633 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP2AO43633 AC008825.2-201ENST00000603374 718 ntBASIC16.58■□□□□ 0.24
CHMP2AO43633 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP2AO43633 AC020907.1-201ENST00000616460 1350 ntBASIC16.58■□□□□ 0.24
CHMP2AO43633 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.58■□□□□ 0.24
CHMP2AO43633 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP2AO43633 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP2AO43633 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP2AO43633 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CHMP2AO43633 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP2AO43633 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP2AO43633 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP2AO43633 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 AL354702.1-201ENST00000442006 1960 ntBASIC16.57■□□□□ 0.24
CHMP2AO43633 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP2AO43633 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CHMP2AO43633 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.57■□□□□ 0.24
CHMP2AO43633 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.57■□□□□ 0.24
CHMP2AO43633 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.57■□□□□ 0.24
CHMP2AO43633 AC044849.1-201ENST00000519737 1188 ntBASIC16.57■□□□□ 0.24
CHMP2AO43633 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CHMP2AO43633 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 AL451050.2-201ENST00000606967 682 ntBASIC16.57■□□□□ 0.24
CHMP2AO43633 MIR6720-201ENST00000611664 98 ntBASIC16.57■□□□□ 0.24
CHMP2AO43633 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CHMP2AO43633 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHMP2AO43633 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHMP2AO43633 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP2AO43633 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.57■□□□□ 0.24
CHMP2AO43633 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP2AO43633 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP2AO43633 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms