Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TO15178 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TO15178 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TO15178 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TO15178 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.62□□□□□ -0.23
TO15178 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TO15178 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TO15178 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.62□□□□□ -0.23
TO15178 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.62□□□□□ -0.23
TO15178 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.62□□□□□ -0.23
TO15178 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TO15178 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TO15178 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TO15178 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TO15178 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.61□□□□□ -0.23
TO15178 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.61□□□□□ -0.23
TO15178 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.61□□□□□ -0.23
TO15178 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TO15178 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.61□□□□□ -0.23
TO15178 Z93015.1-201ENST00000451718 390 ntBASIC13.61□□□□□ -0.23
TO15178 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.61□□□□□ -0.23
TO15178 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.61□□□□□ -0.23
TO15178 RN7SL560P-201ENST00000577943 264 ntBASIC13.61□□□□□ -0.23
TO15178 AC009955.4-201ENST00000597192 544 ntBASIC13.61□□□□□ -0.23
TO15178 MIR6074-201ENST00000612054 107 ntBASIC13.61□□□□□ -0.23
TO15178 AC009542.2-202ENST00000619004 1067 ntBASIC13.61□□□□□ -0.23
TO15178 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 AC015802.1-201ENST00000588104 1449 ntBASIC13.61□□□□□ -0.23
TO15178 AC009093.10-201ENST00000641956 1442 ntBASIC13.61□□□□□ -0.23
TO15178 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TO15178 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TO15178 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.61□□□□□ -0.23
TO15178 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TO15178 AC007191.1-201ENST00000623179 2995 ntBASIC13.61□□□□□ -0.23
TO15178 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TO15178 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.61□□□□□ -0.23
TO15178 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TO15178 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
TO15178 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TO15178 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.6□□□□□ -0.23
TO15178 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.6□□□□□ -0.23
TO15178 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.6□□□□□ -0.23
TO15178 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.6□□□□□ -0.23
TO15178 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TO15178 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TO15178 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.6□□□□□ -0.23
TO15178 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.6□□□□□ -0.23
TO15178 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.6□□□□□ -0.23
TO15178 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TO15178 AL354877.1-201ENST00000424412 413 ntBASIC13.6□□□□□ -0.23
TO15178 FAM58BP-201ENST00000439056 645 ntBASIC13.6□□□□□ -0.23
TO15178 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.6□□□□□ -0.23
TO15178 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TO15178 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 FAM86HP-204ENST00000513466 959 ntBASIC13.6□□□□□ -0.23
TO15178 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.6□□□□□ -0.23
TO15178 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.6□□□□□ -0.23
TO15178 AC132192.2-201ENST00000596206 1147 ntBASIC13.6□□□□□ -0.23
TO15178 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.6□□□□□ -0.23
TO15178 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
TO15178 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.6□□□□□ -0.23
TO15178 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.6□□□□□ -0.23
TO15178 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.6□□□□□ -0.23
TO15178 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TO15178 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TO15178 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms