Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 AC092053.3-201ENST00000641308 4975 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 FGD5P1-202ENST00000614866 2498 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 NKAIN1P1-201ENST00000435754 582 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 BX284668.4-201ENST00000453917 508 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 SERPINA13P-202ENST00000478994 924 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 HIST2H2BC-201ENST00000498492 580 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 AC044849.1-201ENST00000519737 1188 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 AL136301.1-201ENST00000615830 422 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 AC002472.3-201ENST00000640124 621 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 LINC02228-204ENST00000642115 2962 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 LINC01101-201ENST00000622953 1884 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 INE2-201ENST00000630399 1874 ntBASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA2E9PIF3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 AP000593.2-201ENST00000542775 1433 ntBASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 AC020910.5-201ENST00000623668 1865 ntBASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 AL354877.1-201ENST00000424412 413 ntBASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 AL021578.1-201ENST00000613646 709 ntBASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NPIPA2E9PIF3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.46□□□□□ -0.25
NPIPA2E9PIF3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms