Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 AC015909.5-201ENST00000624336 2266 ntBASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.72□□□□□ -0.37
MEIS3P1A6NDR6 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 AC004241.5-201ENST00000623870 2448 ntBASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 REXO1L1P-201ENST00000379010 6598 ntBASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 AL627223.1-201ENST00000416693 442 ntBASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 AL109936.8-201ENST00000641772 604 ntBASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MEIS3P1A6NDR6 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 AGAP10P-201ENST00000454844 2418 ntBASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 HSPA8P5-201ENST00000456928 2069 ntBASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
MEIS3P1A6NDR6 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 AL158070.2-201ENST00000623713 1621 ntBASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
MEIS3P1A6NDR6 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms