Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 MBLAC2-202ENST00000514906 1936 ntBASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 MIR1908-201ENST00000410394 80 ntBASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 HLA-J-204ENST00000495278 958 ntBASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 FAM8A2P-201ENST00000528813 1142 ntBASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC104982.3-201ENST00000581995 514 ntBASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC133540.1-201ENST00000620845 1019 ntBASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV5-4A0A0C4DH59 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 FAM90A7P-201ENST00000382628 1395 ntBASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 FAM90A23P-201ENST00000400136 1395 ntBASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 KRT18P36-201ENST00000411618 1276 ntBASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 RPL18P13-201ENST00000478088 569 ntBASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC007663.3-201ENST00000609632 465 ntBASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.4□□□□□ -0.1
TRBV5-4A0A0C4DH59 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRBV5-4A0A0C4DH59 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.4□□□□□ -0.11
TRBV5-4A0A0C4DH59 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRBV5-4A0A0C4DH59 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms