Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.45□□□□□ -0.1
CSNK1G3Q9Y6M4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.45□□□□□ -0.1
CSNK1G3Q9Y6M4 C18orf15-201ENST00000623680 2534 ntBASIC14.45□□□□□ -0.1
CSNK1G3Q9Y6M4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSNK1G3Q9Y6M4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CSNK1G3Q9Y6M4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AL157407.1-201ENST00000435784 904 ntBASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC234782.1-201ENST00000451950 919 ntBASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 POU5F1P2-201ENST00000521750 823 ntBASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC005962.1-201ENST00000584100 773 ntBASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 PCDHA3-202ENST00000532566 4594 ntBASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.44□□□□□ -0.1
CSNK1G3Q9Y6M4 AC023024.2-201ENST00000623561 1993 ntBASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AL137784.3-201ENST00000623858 2288 ntBASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 EEF1DP6-201ENST00000449232 372 ntBASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AF254983.2-201ENST00000612331 135 ntBASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AC006453.1-201ENST00000636037 1257 ntBASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 CICP24-201ENST00000605464 2705 ntBASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 AC106881.1-201ENST00000605849 3329 ntBASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CSNK1G3Q9Y6M4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms