Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 AC026120.1-201ENST00000611536 926 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AC084121.4-201ENST00000641598 221 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AF228730.8-201ENST00000642140 221 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 KRT8P14-201ENST00000414254 1442 ntBASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TPRKBQ9Y3C4 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 AC118758.2-201ENST00000614242 2813 ntBASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 PCDHB18P-202ENST00000526308 3197 ntBASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.52□□□□□ -0.24
TPRKBQ9Y3C4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 EMBP1-201ENST00000458200 901 ntBASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AL513190.1-201ENST00000621254 727 ntBASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AC055717.3-201ENST00000622967 595 ntBASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 NCLP1-201ENST00000445357 1963 ntBASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 AL157996.1-201ENST00000624684 2299 ntBASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TPRKBQ9Y3C4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 CES1P1-201ENST00000421606 1704 ntBASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TPRKBQ9Y3C4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms