Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HDAC6Q9UBN7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 KRT8P19-201ENST00000551916 1455 ntBASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 RN7SL11P-201ENST00000471305 293 ntBASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 AL136301.1-201ENST00000615830 422 ntBASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HDAC6Q9UBN7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC009093.2-202ENST00000620513 2079 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC068587.6-202ENST00000641839 5619 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 PKD1P5-201ENST00000532415 10291 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 REXO1L4P-201ENST00000605109 1937 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AL133466.1-201ENST00000447582 150 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC104073.2-201ENST00000453737 312 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC091544.8-201ENST00000619490 361 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 AC002472.3-201ENST00000640124 621 ntBASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.69■□□□□ 0.26
HDAC6Q9UBN7 INTS4P1-203ENST00000641008 3683 ntBASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 AC015656.1-201ENST00000624209 3578 ntBASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 AC004899.1-201ENST00000424687 1714 ntBASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HDAC6Q9UBN7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms