Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.75□□□□□ -0.05
MRM3Q9HC36 AL161772.1-201ENST00000610494 4412 ntBASIC14.75□□□□□ -0.05
MRM3Q9HC36 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRM3Q9HC36 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRM3Q9HC36 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRM3Q9HC36 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.75□□□□□ -0.05
MRM3Q9HC36 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.75□□□□□ -0.05
MRM3Q9HC36 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRM3Q9HC36 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
MRM3Q9HC36 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRM3Q9HC36 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 COX5BP1-201ENST00000507622 393 ntBASIC14.74□□□□□ -0.05
MRM3Q9HC36 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 MIR4683-201ENST00000579659 81 ntBASIC14.74□□□□□ -0.05
MRM3Q9HC36 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 ZACNP1-201ENST00000612259 710 ntBASIC14.74□□□□□ -0.05
MRM3Q9HC36 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 AL354989.2-201ENST00000435838 1540 ntBASIC14.74□□□□□ -0.05
MRM3Q9HC36 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 MIR600HG-201ENST00000449175 5984 ntBASIC14.74□□□□□ -0.05
MRM3Q9HC36 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.74□□□□□ -0.05
MRM3Q9HC36 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRM3Q9HC36 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 HSPA8P5-201ENST00000456928 2069 ntBASIC14.73□□□□□ -0.05
MRM3Q9HC36 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRM3Q9HC36 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 AC010141.1-201ENST00000411585 623 ntBASIC14.73□□□□□ -0.05
MRM3Q9HC36 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 CICP12-201ENST00000455801 843 ntBASIC14.73□□□□□ -0.05
MRM3Q9HC36 TMEM198B-204ENST00000484016 896 ntBASIC14.73□□□□□ -0.05
MRM3Q9HC36 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.73□□□□□ -0.05
MRM3Q9HC36 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms