Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AC011498.7-201ENST00000624986 2027 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 AC012617.1-204ENST00000586340 2305 ntBASIC14.12□□□□□ -0.15
BRF2Q9HAW0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BRF2Q9HAW0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AC117489.1-201ENST00000625169 3217 ntBASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AL590640.2-201ENST00000457038 527 ntBASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AP003171.2-201ENST00000528208 925 ntBASIC14.11□□□□□ -0.15
BRF2Q9HAW0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BRF2Q9HAW0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC009093.10-201ENST00000641956 1442 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AL136309.1-201ENST00000403917 691 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 FAM197Y7-201ENST00000432892 766 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AL035414.1-201ENST00000451327 857 ntBASIC14.1□□□□□ -0.15
BRF2Q9HAW0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.1□□□□□ -0.15
BRF2Q9HAW0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms