Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 WASH3P-207ENST00000560956 1394 ntBASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 AL136172.1-201ENST00000598590 1394 ntBASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 AC015909.3-201ENST00000572855 1794 ntBASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
KRTAP4-3Q9BYR4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AL662890.1-201ENST00000396818 632 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 ISCA2P1-201ENST00000425548 448 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 PDIA3P2-201ENST00000428073 158 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AL157407.1-201ENST00000435784 904 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 Z97180.1-201ENST00000445173 988 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 RCC2P8-201ENST00000502779 1035 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 HNRNPA1P36-201ENST00000521313 955 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 RTN3P1-201ENST00000536295 711 ntBASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP4-3Q9BYR4 AC131206.1-201ENST00000538078 1211 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms