Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC091812.2-201ENST00000619081 385 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CICP16-201ENST00000502609 2813 ntBASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SSBP4Q9BWG4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AL133267.1-201ENST00000398220 340 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 TARDBPP1-201ENST00000442013 1203 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 TMEM198B-204ENST00000484016 896 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC079140.1-201ENST00000508039 487 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC106730.1-201ENST00000566722 1090 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC021321.1-201ENST00000607397 1113 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC092902.6-201ENST00000641783 218 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 HLA-A-201ENST00000376802 1334 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 AC111170.3-201ENST00000624282 2464 ntBASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SSBP4Q9BWG4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms