Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PCGF1Q9BSM1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AL354989.2-201ENST00000435838 1540 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 KRT8P14-201ENST00000414254 1442 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 BRWD1P1-201ENST00000401091 371 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AC026954.1-201ENST00000429771 1293 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AC078819.1-201ENST00000547454 765 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AC012085.1-201ENST00000548270 765 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AC023310.1-201ENST00000554836 735 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 RN7SL219P-201ENST00000582872 296 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 ECM1P1-201ENST00000604092 1279 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AC132938.4-201ENST00000623835 848 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 AL033527.4-201ENST00000641026 673 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PRSS30P-206ENST00000641773 873 ntBASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PCGF1Q9BSM1 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 AL138709.1-201ENST00000614840 1693 ntBASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 REXO1L6P-201ENST00000603433 1515 ntBASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PCGF1Q9BSM1 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms