Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC074338.1-201ENST00000416825 156 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 KRT18P64-201ENST00000434946 1219 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC018712.1-201ENST00000455767 687 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 MIR3652-201ENST00000579335 131 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC093458.2-201ENST00000623150 629 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC004877.2-201ENST00000623941 599 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC125807.2-201ENST00000513358 3514 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC215219.1-201ENST00000400706 1817 ntBASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SEC22CQ9BRL7 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 AC102953.2-201ENST00000609755 3026 ntBASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 AL031719.1-201ENST00000623365 2587 ntBASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 MYADML-201ENST00000474610 2147 ntBASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 AC135782.3-201ENST00000562782 2105 ntBASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SEC22CQ9BRL7 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 AC002056.1-201ENST00000395613 760 ntBASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 AC068137.2-201ENST00000605408 478 ntBASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC22CQ9BRL7 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms