Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.74■□□□□ 0.43
EYA3Q99504 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 AL354861.1-201ENST00000445213 355 ntBASIC17.74■□□□□ 0.43
EYA3Q99504 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.74■□□□□ 0.43
EYA3Q99504 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.74■□□□□ 0.43
EYA3Q99504 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.74■□□□□ 0.43
EYA3Q99504 MIR3180-2-201ENST00000581748 88 ntBASIC17.74■□□□□ 0.43
EYA3Q99504 RN7SL470P-201ENST00000583069 259 ntBASIC17.74■□□□□ 0.43
EYA3Q99504 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.74■□□□□ 0.43
EYA3Q99504 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.74■□□□□ 0.43
EYA3Q99504 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
EYA3Q99504 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 AL109954.1-202ENST00000564051 2148 ntBASIC17.74■□□□□ 0.43
EYA3Q99504 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.74■□□□□ 0.43
EYA3Q99504 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EYA3Q99504 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
EYA3Q99504 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.73■□□□□ 0.43
EYA3Q99504 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
EYA3Q99504 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
EYA3Q99504 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
EYA3Q99504 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EYA3Q99504 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 AL157792.1-201ENST00000488281 530 ntBASIC17.73■□□□□ 0.43
EYA3Q99504 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.73■□□□□ 0.43
EYA3Q99504 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.73■□□□□ 0.43
EYA3Q99504 AC138701.2-201ENST00000553634 226 ntBASIC17.73■□□□□ 0.43
EYA3Q99504 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.73■□□□□ 0.43
EYA3Q99504 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.73■□□□□ 0.43
EYA3Q99504 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EYA3Q99504 AC105137.3-201ENST00000617588 984 ntBASIC17.73■□□□□ 0.43
EYA3Q99504 AL591471.1-201ENST00000621855 229 ntBASIC17.73■□□□□ 0.43
EYA3Q99504 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
EYA3Q99504 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EYA3Q99504 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.73■□□□□ 0.43
EYA3Q99504 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.73■□□□□ 0.43
EYA3Q99504 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EYA3Q99504 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.73■□□□□ 0.43
EYA3Q99504 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.72■□□□□ 0.43
EYA3Q99504 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.72■□□□□ 0.43
EYA3Q99504 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.72■□□□□ 0.43
EYA3Q99504 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EYA3Q99504 AC090502.4-201ENST00000551714 1386 ntBASIC17.72■□□□□ 0.43
EYA3Q99504 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EYA3Q99504 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.72■□□□□ 0.43
EYA3Q99504 RN7SL277P-201ENST00000481521 288 ntBASIC17.72■□□□□ 0.43
EYA3Q99504 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.72■□□□□ 0.43
EYA3Q99504 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.72■□□□□ 0.43
EYA3Q99504 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.72■□□□□ 0.43
EYA3Q99504 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.72■□□□□ 0.43
EYA3Q99504 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.72■□□□□ 0.43
EYA3Q99504 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.72■□□□□ 0.43
EYA3Q99504 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
EYA3Q99504 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.72■□□□□ 0.43
EYA3Q99504 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EYA3Q99504 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.72■□□□□ 0.43
EYA3Q99504 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.72■□□□□ 0.43
EYA3Q99504 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EYA3Q99504 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms