Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 KRT18P13-201ENST00000400056 1290 ntBASIC13.17□□□□□ -0.3
RFT1Q96AA3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 KLF2P3-201ENST00000451977 1087 ntBASIC13.17□□□□□ -0.3
RFT1Q96AA3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 SDHAP3-202ENST00000515467 728 ntBASIC13.17□□□□□ -0.3
RFT1Q96AA3 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RFT1Q96AA3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RFT1Q96AA3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.16□□□□□ -0.3
RFT1Q96AA3 TOMM22P5-201ENST00000416399 439 ntBASIC13.16□□□□□ -0.3
RFT1Q96AA3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.16□□□□□ -0.3
RFT1Q96AA3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RFT1Q96AA3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RFT1Q96AA3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 MIR1233-2-201ENST00000408138 82 ntBASIC13.15□□□□□ -0.3
RFT1Q96AA3 MIR1233-1-201ENST00000408722 82 ntBASIC13.15□□□□□ -0.3
RFT1Q96AA3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms