Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 Z98885.3-201ENST00000624882 1757 ntBASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 LINC00115-201ENST00000473798 1317 ntBASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC132872.4-202ENST00000622924 2756 ntBASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 RPL18AP16-201ENST00000424057 531 ntBASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.57□□□□□ -0.88
ALMS1Q8TCU4 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 RPSAP12-201ENST00000435879 888 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 SHMT1P1-201ENST00000419974 1312 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC009041.4-201ENST00000620075 638 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC092115.1-201ENST00000566277 1402 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC120498.5-201ENST00000561757 299 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 RN7SL121P-201ENST00000584223 273 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC021321.1-201ENST00000607397 1113 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 SNRPCP15-201ENST00000424055 192 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CRIP1P2-201ENST00000425396 228 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 PRR20FP-201ENST00000603320 180 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 AC020922.4-201ENST00000621389 339 ntBASIC9.56□□□□□ -0.88
ALMS1Q8TCU4 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms