Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LMO3Q8TAP4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LMO3Q8TAP4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 AP005482.1-201ENST00000563722 1273 ntBASIC15.7■□□□□ 0.1
LMO3Q8TAP4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 AC244157.2-201ENST00000616239 1006 ntBASIC15.7■□□□□ 0.1
LMO3Q8TAP4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LMO3Q8TAP4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.69■□□□□ 0.1
LMO3Q8TAP4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 AC079178.1-201ENST00000420915 656 ntBASIC15.69■□□□□ 0.1
LMO3Q8TAP4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 AL354877.1-201ENST00000424412 413 ntBASIC15.69■□□□□ 0.1
LMO3Q8TAP4 ST13P19-201ENST00000442505 1124 ntBASIC15.69■□□□□ 0.1
LMO3Q8TAP4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 GPR53P-205ENST00000457298 1084 ntBASIC15.69■□□□□ 0.1
LMO3Q8TAP4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LMO3Q8TAP4 TUBB8P4-201ENST00000511806 1324 ntBASIC15.68■□□□□ 0.1
LMO3Q8TAP4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LMO3Q8TAP4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms