Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 SORD2P-201ENST00000558556 1069 ntBASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AC005962.1-201ENST00000584100 773 ntBASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AP000346.4-201ENST00000614827 381 ntBASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 TMBIM7P-202ENST00000641474 1516 ntBASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AC099063.4-201ENST00000641099 1602 ntBASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 AC007686.3-201ENST00000619017 3487 ntBASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAM1L1Q8N609 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 AP001267.2-201ENST00000532619 2086 ntBASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 C8orf49-201ENST00000525043 1968 ntBASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 SERPINA13P-202ENST00000478994 924 ntBASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 AC068418.2-201ENST00000577309 3703 ntBASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAM1L1Q8N609 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 AC004899.1-201ENST00000424687 1714 ntBASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAM1L1Q8N609 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAM1L1Q8N609 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAM1L1Q8N609 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAM1L1Q8N609 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAM1L1Q8N609 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAM1L1Q8N609 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms