Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 AC098657.1-201ENST00000416270 1135 ntBASIC20.18■□□□□ 0.82
UBR1Q8IWV7 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 NEK4P3-201ENST00000604859 544 ntBASIC20.18■□□□□ 0.82
UBR1Q8IWV7 AC245369.7-201ENST00000631386 350 ntBASIC20.18■□□□□ 0.82
UBR1Q8IWV7 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBR1Q8IWV7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 AL121949.3-201ENST00000406684 385 ntBASIC20.17■□□□□ 0.82
UBR1Q8IWV7 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 TREX1-203ENST00000456089 629 ntTSL 3 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 MIR2278-201ENST00000516344 96 ntBASIC20.17■□□□□ 0.82
UBR1Q8IWV7 AC142086.5-202ENST00000562500 217 ntBASIC20.17■□□□□ 0.82
UBR1Q8IWV7 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 AC091304.3-201ENST00000566500 716 ntBASIC20.17■□□□□ 0.82
UBR1Q8IWV7 AC132825.4-202ENST00000578792 434 ntBASIC20.17■□□□□ 0.82
UBR1Q8IWV7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 AC004466.2-201ENST00000614749 516 ntBASIC20.17■□□□□ 0.82
UBR1Q8IWV7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 PPT1-215ENST00000641471 2368 ntBASIC20.17■□□□□ 0.82
UBR1Q8IWV7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.17■□□□□ 0.82
UBR1Q8IWV7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 FAM187B2P-201ENST00000577135 713 ntBASIC20.16■□□□□ 0.82
UBR1Q8IWV7 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 FAM226B-201ENST00000602508 1490 ntBASIC20.16■□□□□ 0.82
UBR1Q8IWV7 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AC103592.1-201ENST00000394513 664 ntBASIC20.16■□□□□ 0.82
UBR1Q8IWV7 U73169.1-201ENST00000395152 367 ntBASIC20.16■□□□□ 0.82
UBR1Q8IWV7 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 GULOP-201ENST00000454030 748 ntBASIC20.16■□□□□ 0.82
UBR1Q8IWV7 CDK4P1-201ENST00000454213 828 ntBASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBR1Q8IWV7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBR1Q8IWV7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBR1Q8IWV7 AC215219.1-201ENST00000400706 1817 ntBASIC20.15■□□□□ 0.82
UBR1Q8IWV7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBR1Q8IWV7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.15■□□□□ 0.82
UBR1Q8IWV7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBR1Q8IWV7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBR1Q8IWV7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms