Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 AC092580.1-201ENST00000433998 658 ntBASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 AC140658.4-201ENST00000561990 352 ntBASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 AC090386.2-201ENST00000623010 1039 ntBASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 CICP6-201ENST00000457191 2729 ntBASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.62■□□□□ 0.09
NPAS4Q8IUM7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 GUSBP10-201ENST00000417412 665 ntBASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 RPL18AP8-201ENST00000486071 528 ntBASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AC021016.3-201ENST00000608367 477 ntBASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 AP000322.3-201ENST00000608665 388 ntBASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 NFIC-211ENST00000641145 8399 ntBASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NPAS4Q8IUM7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms