Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 AP006294.1-201ENST00000415407 339 ntBASIC13.68□□□□□ -0.22
VRK2Q86Y07 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 FTLP10-202ENST00000505798 471 ntBASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 MST1P2-201ENST00000457982 2291 ntBASIC13.67□□□□□ -0.22
VRK2Q86Y07 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC010327.5-201ENST00000586923 3061 ntBASIC13.67□□□□□ -0.22
VRK2Q86Y07 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 AC009093.2-202ENST00000620513 2079 ntBASIC13.67□□□□□ -0.22
VRK2Q86Y07 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VRK2Q86Y07 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
VRK2Q86Y07 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
VRK2Q86Y07 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms