Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PTF1AQ7RTS3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTF1AQ7RTS3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.47■□□□□ 0.55
PTF1AQ7RTS3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTF1AQ7RTS3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTF1AQ7RTS3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTF1AQ7RTS3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 LINC00554-201ENST00000564841 3011 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 NQO2-204ENST00000380454 851 ntTSL 2 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 PSAT1P2-201ENST00000426107 972 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 GPX3-202ENST00000517973 612 ntTSL 3 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AC087203.1-201ENST00000532111 1181 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AC091304.3-201ENST00000566500 716 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 HNRNPA1P16-201ENST00000575692 955 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AC006116.2-201ENST00000589958 988 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 GGNBP1-204ENST00000613113 887 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AL591424.3-201ENST00000614278 872 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 PDXDC2P-206ENST00000534700 1315 ntBASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.46■□□□□ 0.55
PTF1AQ7RTS3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.46■□□□□ 0.54
PTF1AQ7RTS3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 GOLGA6L16P-201ENST00000441780 1299 ntBASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 RN7SL556P-201ENST00000582856 298 ntBASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTF1AQ7RTS3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 KRT18P4-201ENST00000422599 1288 ntBASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 RN7SL128P-201ENST00000467883 305 ntBASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 AC025186.1-201ENST00000478174 870 ntBASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 RN7SKP155-201ENST00000516031 288 ntBASIC18.44■□□□□ 0.54
PTF1AQ7RTS3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms