Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 RN7SL788P-201ENST00000460504 316 ntBASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KDM3BQ7LBC6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 AC117503.4-201ENST00000623229 1418 ntBASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 AC079112.1-201ENST00000454972 939 ntBASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 RNA5SP417-201ENST00000516459 108 ntBASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 AC068760.1-201ENST00000493579 1953 ntBASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KDM3BQ7LBC6 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 KRT8P18-201ENST00000413425 1445 ntBASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 BAP1-211ENST00000615113 489 ntBASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AC006372.4-201ENST00000624122 1543 ntBASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 SLC25A15P3-201ENST00000505530 290 ntBASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 AP001184.1-201ENST00000637936 376 ntBASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
KDM3BQ7LBC6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDM3BQ7LBC6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
KDM3BQ7LBC6 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KDM3BQ7LBC6 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KDM3BQ7LBC6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.29■□□□□ 0.52
KDM3BQ7LBC6 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KDM3BQ7LBC6 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.29■□□□□ 0.52
KDM3BQ7LBC6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms