Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 MIR663B-201ENST00000408361 115 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AL354877.1-201ENST00000424412 413 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC005695.3-201ENST00000614522 232 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AL096828.3-201ENST00000615354 462 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AL136172.1-201ENST00000598590 1394 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC018529.2-202ENST00000611482 3087 ntBASIC14.18□□□□□ -0.14
RNF44Q7L0R7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF44Q7L0R7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 FAM86MP-201ENST00000340703 885 ntBASIC14.17□□□□□ -0.14
RNF44Q7L0R7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AL591846.1-201ENST00000451736 433 ntBASIC14.17□□□□□ -0.14
RNF44Q7L0R7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AC009955.4-201ENST00000597192 544 ntBASIC14.17□□□□□ -0.14
RNF44Q7L0R7 AC091271.1-201ENST00000611877 1162 ntBASIC14.17□□□□□ -0.14
RNF44Q7L0R7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF44Q7L0R7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms