Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AC015688.4-201ENST00000580780 1647 ntBASIC16.99■□□□□ 0.31
USP50Q70EL3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
USP50Q70EL3 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.99■□□□□ 0.31
USP50Q70EL3 NRADDP-201ENST00000437305 691 ntBASIC16.99■□□□□ 0.31
USP50Q70EL3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.99■□□□□ 0.31
USP50Q70EL3 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.99■□□□□ 0.31
USP50Q70EL3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
USP50Q70EL3 AL132994.1-201ENST00000554098 400 ntBASIC16.99■□□□□ 0.31
USP50Q70EL3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.99■□□□□ 0.31
USP50Q70EL3 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.99■□□□□ 0.31
USP50Q70EL3 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.99■□□□□ 0.31
USP50Q70EL3 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.99■□□□□ 0.31
USP50Q70EL3 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.99■□□□□ 0.31
USP50Q70EL3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.99■□□□□ 0.31
USP50Q70EL3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
USP50Q70EL3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP50Q70EL3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.98■□□□□ 0.31
USP50Q70EL3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.98■□□□□ 0.31
USP50Q70EL3 AL365181.1-201ENST00000564032 1828 ntBASIC16.98■□□□□ 0.31
USP50Q70EL3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.98■□□□□ 0.31
USP50Q70EL3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
USP50Q70EL3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.98■□□□□ 0.31
USP50Q70EL3 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.98■□□□□ 0.31
USP50Q70EL3 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 AC087203.1-201ENST00000532111 1181 ntBASIC16.98■□□□□ 0.31
USP50Q70EL3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.98■□□□□ 0.31
USP50Q70EL3 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC16.98■□□□□ 0.31
USP50Q70EL3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.98■□□□□ 0.31
USP50Q70EL3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
USP50Q70EL3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
USP50Q70EL3 AC112693.3-201ENST00000624819 1983 ntBASIC16.98■□□□□ 0.31
USP50Q70EL3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
USP50Q70EL3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP50Q70EL3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 AC138761.6-201ENST00000583997 1423 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP50Q70EL3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 C18orf15-201ENST00000623680 2534 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP50Q70EL3 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
USP50Q70EL3 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
USP50Q70EL3 FAM21EP-201ENST00000417804 985 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.97■□□□□ 0.31
USP50Q70EL3 AC104961.1-201ENST00000427605 771 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 AC092573.1-201ENST00000433054 884 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC16.97■□□□□ 0.31
USP50Q70EL3 AC092896.1-201ENST00000465850 380 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 AC025186.1-201ENST00000478174 870 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 AC100858.1-201ENST00000514059 1228 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.97■□□□□ 0.31
USP50Q70EL3 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.97■□□□□ 0.31
USP50Q70EL3 AC005586.2-201ENST00000563946 837 ntBASIC16.97■□□□□ 0.31
USP50Q70EL3 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms