Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.52□□□□□ -0.57
KCNIP4Q6PIL6 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
KCNIP4Q6PIL6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
KCNIP4Q6PIL6 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
KCNIP4Q6PIL6 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
KCNIP4Q6PIL6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 POM121L14P-201ENST00000406100 1558 ntBASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 AL078644.1-201ENST00000609881 752 ntBASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 AC018665.1-201ENST00000622927 1362 ntBASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
KCNIP4Q6PIL6 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 TNRC18P1-201ENST00000502875 3650 ntBASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 HMGA1P7-201ENST00000406908 502 ntBASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 IGHV3-65-201ENST00000523210 341 ntBASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 KRT126P-201ENST00000549467 1181 ntBASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.5□□□□□ -0.57
KCNIP4Q6PIL6 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms