Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 PHKG1P2-201ENST00000457537 863 ntBASIC13.02□□□□□ -0.33
C11orf88Q6PI97 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 RARRES2P9-201ENST00000565168 469 ntBASIC13.02□□□□□ -0.33
C11orf88Q6PI97 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 AL390955.2-201ENST00000603032 514 ntBASIC13.02□□□□□ -0.33
C11orf88Q6PI97 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
C11orf88Q6PI97 Z82170.1-201ENST00000625081 3192 ntBASIC13.02□□□□□ -0.33
C11orf88Q6PI97 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 FAM220BP-201ENST00000377689 816 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TREML5P-201ENST00000421694 576 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TSPY16P-201ENST00000449843 468 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC239800.4-201ENST00000603712 296 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC009118.2-201ENST00000613275 655 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC073592.8-201ENST00000624126 511 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.01□□□□□ -0.33
C11orf88Q6PI97 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C11orf88Q6PI97 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms