Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTR9Q6PD62 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTR9Q6PD62 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTR9Q6PD62 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTR9Q6PD62 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.51■□□□□ 0.39
CTR9Q6PD62 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTR9Q6PD62 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTR9Q6PD62 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.51■□□□□ 0.39
CTR9Q6PD62 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.51■□□□□ 0.39
CTR9Q6PD62 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 HLA-J-204ENST00000495278 958 ntBASIC17.5■□□□□ 0.39
CTR9Q6PD62 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTR9Q6PD62 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTR9Q6PD62 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 AC136759.1-202ENST00000530858 2194 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 EIF4HP1-201ENST00000453115 687 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 AC013355.1-201ENST00000562625 723 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 SNORD3B-2-202ENST00000571722 791 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 AC090164.2-201ENST00000611487 516 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 AC138649.2-201ENST00000615886 705 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 KRT8P28-201ENST00000433288 1390 ntBASIC17.49■□□□□ 0.39
CTR9Q6PD62 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTR9Q6PD62 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.49■□□□□ 0.39
CTR9Q6PD62 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 TMBIM7P-202ENST00000641474 1516 ntBASIC17.48■□□□□ 0.39
CTR9Q6PD62 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTR9Q6PD62 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CTR9Q6PD62 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms