Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 SRD5A3P1-201ENST00000603021 949 ntBASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM53Q6P2H8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 AL365181.3-201ENST00000605886 3222 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 MRPS18AP1-201ENST00000414458 589 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 MEP1AP4-201ENST00000423244 1087 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 TSPY16P-201ENST00000449843 468 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 DOC2GP-202ENST00000514950 1163 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 TPRX2P-201ENST00000535362 881 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 AC104794.3-201ENST00000566840 1248 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 AC015910.1-201ENST00000579400 975 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 AL096865.1-201ENST00000606796 927 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 AC099521.2-201ENST00000619354 2036 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM53Q6P2H8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AC097359.2-201ENST00000604992 2389 ntBASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 AC102953.2-201ENST00000609755 3026 ntBASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM53Q6P2H8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms