Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
SSBP1Q04837 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 C20orf181-201ENST00000623918 480 ntBASIC12.51□□□□□ -0.41
SSBP1Q04837 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 AC003102.2-201ENST00000589195 1469 ntBASIC12.51□□□□□ -0.41
SSBP1Q04837 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SSBP1Q04837 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP1Q04837 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SSBP1Q04837 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 SPDYE14P-201ENST00000442619 822 ntBASIC12.5□□□□□ -0.41
SSBP1Q04837 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 KRT18P56-201ENST00000507275 550 ntBASIC12.5□□□□□ -0.41
SSBP1Q04837 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP1Q04837 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP1Q04837 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP1Q04837 AC103988.2-201ENST00000561804 725 ntBASIC12.5□□□□□ -0.41
SSBP1Q04837 AC022145.2-201ENST00000598203 171 ntBASIC12.5□□□□□ -0.41
SSBP1Q04837 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP1Q04837 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.5□□□□□ -0.41
SSBP1Q04837 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP1Q04837 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP1Q04837 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
SSBP1Q04837 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
SSBP1Q04837 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms