Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GABREP78334 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14□□□□□ -0.17
GABREP78334 PPT1-215ENST00000641471 2368 ntBASIC14□□□□□ -0.17
GABREP78334 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14□□□□□ -0.17
GABREP78334 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14□□□□□ -0.17
GABREP78334 NME2-201ENST00000393183 568 ntTSL 2 BASIC14□□□□□ -0.17
GABREP78334 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14□□□□□ -0.17
GABREP78334 TLE1P1-201ENST00000422965 589 ntBASIC14□□□□□ -0.17
GABREP78334 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14□□□□□ -0.17
GABREP78334 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14□□□□□ -0.17
GABREP78334 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14□□□□□ -0.17
GABREP78334 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 PIN4P1-201ENST00000451079 396 ntBASIC14□□□□□ -0.17
GABREP78334 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14□□□□□ -0.17
GABREP78334 AC130709.1-201ENST00000484779 1212 ntBASIC14□□□□□ -0.17
GABREP78334 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14□□□□□ -0.17
GABREP78334 AL157792.1-201ENST00000488281 530 ntBASIC14□□□□□ -0.17
GABREP78334 ALG3P1-201ENST00000508806 1114 ntBASIC14□□□□□ -0.17
GABREP78334 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14□□□□□ -0.17
GABREP78334 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14□□□□□ -0.17
GABREP78334 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14□□□□□ -0.17
GABREP78334 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14□□□□□ -0.17
GABREP78334 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GABREP78334 AC105250.1-201ENST00000509378 2057 ntBASIC14□□□□□ -0.17
GABREP78334 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14□□□□□ -0.17
GABREP78334 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABREP78334 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
GABREP78334 PCDHA3-202ENST00000532566 4594 ntBASIC13.99□□□□□ -0.17
GABREP78334 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.99□□□□□ -0.17
GABREP78334 SALL4P5-201ENST00000419001 1760 ntBASIC13.99□□□□□ -0.17
GABREP78334 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GABREP78334 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.99□□□□□ -0.17
GABREP78334 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.99□□□□□ -0.17
GABREP78334 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 AL627422.1-201ENST00000434104 580 ntBASIC13.99□□□□□ -0.17
GABREP78334 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.99□□□□□ -0.17
GABREP78334 AL645933.1-201ENST00000440087 609 ntBASIC13.99□□□□□ -0.17
GABREP78334 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.99□□□□□ -0.17
GABREP78334 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.99□□□□□ -0.17
GABREP78334 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.99□□□□□ -0.17
GABREP78334 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.99□□□□□ -0.17
GABREP78334 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
GABREP78334 AP003398.1-201ENST00000531124 318 ntBASIC13.99□□□□□ -0.17
GABREP78334 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.99□□□□□ -0.17
GABREP78334 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 MIR4522-201ENST00000584932 87 ntBASIC13.99□□□□□ -0.17
GABREP78334 RPL17P45-201ENST00000586289 509 ntBASIC13.99□□□□□ -0.17
GABREP78334 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.99□□□□□ -0.17
GABREP78334 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 LINC01165-201ENST00000445190 1623 ntBASIC13.99□□□□□ -0.17
GABREP78334 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
GABREP78334 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.99□□□□□ -0.17
GABREP78334 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABREP78334 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms