Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC027612.1-201ENST00000445234 2395 ntBASIC16.64■□□□□ 0.25
TPM4P67936 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM4P67936 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM4P67936 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM4P67936 RN7SL832P-201ENST00000607781 1756 ntBASIC16.64■□□□□ 0.25
TPM4P67936 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM4P67936 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.64■□□□□ 0.25
TPM4P67936 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TPM4P67936 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TPM4P67936 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.64■□□□□ 0.25
TPM4P67936 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TPM4P67936 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 AC130686.1-201ENST00000622936 2466 ntBASIC16.63■□□□□ 0.25
TPM4P67936 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 AL138799.1-201ENST00000448213 1675 ntBASIC16.63■□□□□ 0.25
TPM4P67936 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.63■□□□□ 0.25
TPM4P67936 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.63■□□□□ 0.25
TPM4P67936 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 AC092364.2-202ENST00000597012 1073 ntBASIC16.63■□□□□ 0.25
TPM4P67936 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.63■□□□□ 0.25
TPM4P67936 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 CR383656.2-201ENST00000548656 2254 ntBASIC16.63■□□□□ 0.25
TPM4P67936 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 AC012617.1-204ENST00000586340 2305 ntBASIC16.63■□□□□ 0.25
TPM4P67936 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.63■□□□□ 0.25
TPM4P67936 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 MYADML-201ENST00000474610 2147 ntBASIC16.63■□□□□ 0.25
TPM4P67936 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TPM4P67936 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TPM4P67936 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM4P67936 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TPM4P67936 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM4P67936 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM4P67936 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
TPM4P67936 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
TPM4P67936 MIR6074-201ENST00000612054 107 ntBASIC16.62■□□□□ 0.25
TPM4P67936 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 AL158212.4-201ENST00000624062 1286 ntBASIC16.62■□□□□ 0.25
TPM4P67936 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TPM4P67936 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.62■□□□□ 0.25
TPM4P67936 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TPM4P67936 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TPM4P67936 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms