Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CXCR4P61073 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CXCR4P61073 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CXCR4P61073 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.49□□□□□ -0.25
CXCR4P61073 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.49□□□□□ -0.25
CXCR4P61073 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.49□□□□□ -0.25
CXCR4P61073 SDHAP3-202ENST00000515467 728 ntBASIC13.49□□□□□ -0.25
CXCR4P61073 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.49□□□□□ -0.25
CXCR4P61073 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.49□□□□□ -0.25
CXCR4P61073 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 AL138828.2-201ENST00000615812 383 ntBASIC13.49□□□□□ -0.25
CXCR4P61073 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.49□□□□□ -0.25
CXCR4P61073 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.49□□□□□ -0.25
CXCR4P61073 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
CXCR4P61073 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CXCR4P61073 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CXCR4P61073 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 DMBT1P1-203ENST00000636837 4628 ntBASIC13.49□□□□□ -0.25
CXCR4P61073 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CXCR4P61073 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCR4P61073 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.49□□□□□ -0.25
CXCR4P61073 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CXCR4P61073 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CXCR4P61073 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CXCR4P61073 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 AC254562.1-201ENST00000417586 456 ntBASIC13.48□□□□□ -0.25
CXCR4P61073 UPF3AP3-201ENST00000420996 769 ntBASIC13.48□□□□□ -0.25
CXCR4P61073 BX842568.4-201ENST00000421222 227 ntBASIC13.48□□□□□ -0.25
CXCR4P61073 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.48□□□□□ -0.25
CXCR4P61073 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 GAPDHP40-201ENST00000505218 1006 ntBASIC13.48□□□□□ -0.25
CXCR4P61073 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CXCR4P61073 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
CXCR4P61073 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.48□□□□□ -0.25
CXCR4P61073 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CXCR4P61073 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CXCR4P61073 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CXCR4P61073 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CXCR4P61073 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CXCR4P61073 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms