Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 TUBB3P1-201ENST00000405796 1332 ntBASIC13.57□□□□□ -0.24
CDC42P60953 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 FAM90A12P-201ENST00000519497 2375 ntBASIC13.57□□□□□ -0.24
CDC42P60953 FAM90A24P-201ENST00000520792 2369 ntBASIC13.57□□□□□ -0.24
CDC42P60953 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.57□□□□□ -0.24
CDC42P60953 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.57□□□□□ -0.24
CDC42P60953 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDC42P60953 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CLK3P2-201ENST00000427566 1453 ntBASIC13.56□□□□□ -0.24
CDC42P60953 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CDC42P60953 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDC42P60953 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC42P60953 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CDC42P60953 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 AL353779.1-201ENST00000434793 351 ntBASIC13.56□□□□□ -0.24
CDC42P60953 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 DNAJB3-201ENST00000446806 729 ntBASIC13.56□□□□□ -0.24
CDC42P60953 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC42P60953 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC42P60953 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 AL512361.1-201ENST00000554200 418 ntBASIC13.56□□□□□ -0.24
CDC42P60953 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.56□□□□□ -0.24
CDC42P60953 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.56□□□□□ -0.24
CDC42P60953 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CDC42P60953 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CDC42P60953 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDC42P60953 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDC42P60953 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 AC111170.3-201ENST00000624282 2464 ntBASIC13.55□□□□□ -0.24
CDC42P60953 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CDC42P60953 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.55□□□□□ -0.24
CDC42P60953 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDC42P60953 AC015909.5-201ENST00000624336 2266 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms