Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP4BP1P59074 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP4BP1P59074 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CHMP4BP1P59074 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP4BP1P59074 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.96■□□□□ 0.3
CHMP4BP1P59074 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 MIR663B-201ENST00000408361 115 ntBASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC079178.1-201ENST00000420915 656 ntBASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 HSPB1P2-201ENST00000448722 546 ntBASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC244157.2-201ENST00000616239 1006 ntBASIC16.95■□□□□ 0.3
CHMP4BP1P59074 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP4BP1P59074 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 AC021723.1-201ENST00000486306 515 ntBASIC16.94■□□□□ 0.3
CHMP4BP1P59074 AC091804.1-201ENST00000486888 567 ntBASIC16.94■□□□□ 0.3
CHMP4BP1P59074 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 AC044849.1-201ENST00000519737 1188 ntBASIC16.94■□□□□ 0.3
CHMP4BP1P59074 RN7SL713P-201ENST00000582127 302 ntBASIC16.94■□□□□ 0.3
CHMP4BP1P59074 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 AC004466.1-201ENST00000599515 1080 ntBASIC16.94■□□□□ 0.3
CHMP4BP1P59074 AC073413.1-201ENST00000603927 732 ntBASIC16.94■□□□□ 0.3
CHMP4BP1P59074 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHMP4BP1P59074 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP4BP1P59074 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms