Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 AC004945.1-201ENST00000416738 983 ntBASIC16.22■□□□□ 0.19
PMS1P54277 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.22■□□□□ 0.19
PMS1P54277 AL355864.2-201ENST00000447420 863 ntBASIC16.22■□□□□ 0.19
PMS1P54277 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.22■□□□□ 0.19
PMS1P54277 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.22■□□□□ 0.19
PMS1P54277 RNA5SP486-201ENST00000515961 83 ntBASIC16.22■□□□□ 0.19
PMS1P54277 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.22■□□□□ 0.19
PMS1P54277 SORD2P-201ENST00000558556 1069 ntBASIC16.22■□□□□ 0.19
PMS1P54277 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PMS1P54277 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.22■□□□□ 0.19
PMS1P54277 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PMS1P54277 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PMS1P54277 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PMS1P54277 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.22■□□□□ 0.19
PMS1P54277 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.22■□□□□ 0.19
PMS1P54277 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PMS1P54277 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PMS1P54277 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PMS1P54277 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 KRT8P24-201ENST00000560290 1559 ntBASIC16.21■□□□□ 0.19
PMS1P54277 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.21■□□□□ 0.19
PMS1P54277 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.21■□□□□ 0.19
PMS1P54277 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.21■□□□□ 0.19
PMS1P54277 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.21■□□□□ 0.19
PMS1P54277 AC078819.1-201ENST00000547454 765 ntBASIC16.21■□□□□ 0.19
PMS1P54277 AC012085.1-201ENST00000548270 765 ntBASIC16.21■□□□□ 0.19
PMS1P54277 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.21■□□□□ 0.19
PMS1P54277 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.21■□□□□ 0.19
PMS1P54277 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.21■□□□□ 0.19
PMS1P54277 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
PMS1P54277 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PMS1P54277 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.21■□□□□ 0.19
PMS1P54277 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 KRT8P28-201ENST00000433288 1390 ntBASIC16.21■□□□□ 0.19
PMS1P54277 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.21■□□□□ 0.19
PMS1P54277 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PMS1P54277 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PMS1P54277 MBLAC2-202ENST00000514906 1936 ntBASIC16.21■□□□□ 0.19
PMS1P54277 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PMS1P54277 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.21■□□□□ 0.18
PMS1P54277 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PMS1P54277 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PMS1P54277 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PMS1P54277 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PMS1P54277 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
PMS1P54277 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PMS1P54277 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PMS1P54277 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PMS1P54277 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.2■□□□□ 0.18
PMS1P54277 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.2■□□□□ 0.18
PMS1P54277 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PMS1P54277 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms