Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 RNA5SP359-201ENST00000364838 113 ntBASIC16.22■□□□□ 0.19
CDK7P50613 AC234644.1-201ENST00000406065 370 ntBASIC16.22■□□□□ 0.19
CDK7P50613 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.22■□□□□ 0.19
CDK7P50613 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.22■□□□□ 0.19
CDK7P50613 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.22■□□□□ 0.19
CDK7P50613 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 AP003398.1-201ENST00000531124 318 ntBASIC16.22■□□□□ 0.19
CDK7P50613 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.22■□□□□ 0.19
CDK7P50613 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 AC107464.3-201ENST00000609172 737 ntBASIC16.22■□□□□ 0.19
CDK7P50613 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.22■□□□□ 0.19
CDK7P50613 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDK7P50613 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 AC013726.1-201ENST00000563747 2285 ntBASIC16.22■□□□□ 0.19
CDK7P50613 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDK7P50613 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 AL009178.2-201ENST00000597278 2719 ntBASIC16.22■□□□□ 0.19
CDK7P50613 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDK7P50613 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK7P50613 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDK7P50613 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.21■□□□□ 0.19
CDK7P50613 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.21■□□□□ 0.19
CDK7P50613 AC073347.1-201ENST00000421633 2643 ntBASIC16.21■□□□□ 0.19
CDK7P50613 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.21■□□□□ 0.19
CDK7P50613 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.21■□□□□ 0.19
CDK7P50613 ALG1L6P-201ENST00000515248 758 ntBASIC16.21■□□□□ 0.19
CDK7P50613 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.21■□□□□ 0.19
CDK7P50613 AP000911.2-201ENST00000534330 502 ntBASIC16.21■□□□□ 0.19
CDK7P50613 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.21■□□□□ 0.19
CDK7P50613 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.21■□□□□ 0.19
CDK7P50613 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.21■□□□□ 0.19
CDK7P50613 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.21■□□□□ 0.19
CDK7P50613 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.21■□□□□ 0.19
CDK7P50613 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDK7P50613 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDK7P50613 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.21■□□□□ 0.19
CDK7P50613 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.21■□□□□ 0.18
CDK7P50613 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.21■□□□□ 0.18
CDK7P50613 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDK7P50613 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDK7P50613 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDK7P50613 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDK7P50613 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CDK7P50613 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.2■□□□□ 0.18
CDK7P50613 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.2■□□□□ 0.18
CDK7P50613 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.2■□□□□ 0.18
CDK7P50613 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDK7P50613 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 AC073911.3-201ENST00000624401 631 ntBASIC16.2■□□□□ 0.18
CDK7P50613 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.2■□□□□ 0.18
CDK7P50613 AC090502.4-201ENST00000551714 1386 ntBASIC16.2■□□□□ 0.18
CDK7P50613 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDK7P50613 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms